would that make the dome lights act weird though? They were but once I pulled the bulb from the floor dome light they work as should
See if the bulb you pulled was the correct bulb. It could solve one of your mysteries.
I spent 2 whole afternoons trouble shooting dome/courtesy/cargo light issue.
And after verifying that literally everything was right (including replacing the door buttons which was needed and a new headlight switch that probably wasn’t necessary) I found the wrong bulb in the cargo light socket that was causing the intermittent issues that appeared to be a ground problem.
As far as the rest of your issue, start by checking power into and out of the headlight switch for the running lights. But I agree, if nothing works it’s more likely a ground problem ?